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In order to evaluate the impact of green technology innovation on ecological-economic efficiency of strategic emerging industries,the evaluationmodelisdevelopedby the entropy weightedTOPSISmethod. Through analyzing the impact factors of green technology innovation, the evaluation indicators system is constructed including positive factors and obstacles factors. The evaluation process is proposed, and six kinds of industry are selected to be the research objects on which the empirical analysis is made, the results show that the highest is the home audio-visual equipment manufacturers S6(E) whose weight is 0.7940 and the lowest is the electronic computer manufacturers S2(E) whose weight is 0.1938, finally, the countermeasures are proposed. The findings can avoid the subjectivity of human factors on the empowerment and solve the limitations of sample size and data distribution, and can help researchers precisely find the deficiency based on evaluation results.